Analysis of Ligand-Protein Contacts in PDB entry:
2VXJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 116 ligands in PDB entry 2VXJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BGC
Y
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
Y
2 11BETA-D-GALACTOPYRANOSE
lig 3
GLA
Y
3 11ALPHA-D-GALACTOPYRANOSE
lig 4
BGC
Z
1 12BETA-D-GLUCOPYRANOSE
lig 5
GAL
Z
2 11BETA-D-GALACTOPYRANOSE
lig 6
GLA
Z
3 11ALPHA-D-GALACTOPYRANOSE
lig 7
GLC
a
1 12ALPHA-D-GLUCOPYRANOSE
lig 8
GAL
a
2 11BETA-D-GALACTOPYRANOSE
lig 9
GLA
a
3 11ALPHA-D-GALACTOPYRANOSE
lig 10
BGC
b
1 12BETA-D-GLUCOPYRANOSE
lig 11
GAL
b
2 11BETA-D-GALACTOPYRANOSE
lig 12
GLA
b
3 11ALPHA-D-GALACTOPYRANOSE
lig 13
GLC
c
1 12ALPHA-D-GLUCOPYRANOSE
lig 14
GAL
c
2 11BETA-D-GALACTOPYRANOSE
lig 15
GLA
c
3 11ALPHA-D-GALACTOPYRANOSE
lig 16
BGC
d
1 12BETA-D-GLUCOPYRANOSE
lig 17
GAL
d
2 11BETA-D-GALACTOPYRANOSE
lig 18
GLA
d
3 11ALPHA-D-GALACTOPYRANOSE
lig 19
BGC
e
1 12BETA-D-GLUCOPYRANOSE
lig 20
GAL
e
2 11BETA-D-GALACTOPYRANOSE
lig 21
GLA
e
3 11ALPHA-D-GALACTOPYRANOSE
lig 22
BGC
f
1 12BETA-D-GLUCOPYRANOSE
lig 23
GAL
f
2 11BETA-D-GALACTOPYRANOSE
lig 24
GLA
f
3 11ALPHA-D-GALACTOPYRANOSE
lig 25
BGC
g
1 12BETA-D-GLUCOPYRANOSE
lig 26
GAL
g
2 11BETA-D-GALACTOPYRANOSE
lig 27
GLA
g
3 11ALPHA-D-GALACTOPYRANOSE
lig 28
BGC
h
1 12BETA-D-GLUCOPYRANOSE
lig 29
GAL
h
2 11BETA-D-GALACTOPYRANOSE
lig 30
GLA
h
3 11ALPHA-D-GALACTOPYRANOSE
lig 31
BGC
i
1 12BETA-D-GLUCOPYRANOSE
lig 32
GAL
i
2 11BETA-D-GALACTOPYRANOSE
lig 33
GLA
i
3 11ALPHA-D-GALACTOPYRANOSE
lig 34
BGC
j
1 12BETA-D-GLUCOPYRANOSE
lig 35
GAL
j
2 11BETA-D-GALACTOPYRANOSE
lig 36
GLA
j
3 11ALPHA-D-GALACTOPYRANOSE
lig 37
BGC
k
1 12BETA-D-GLUCOPYRANOSE
lig 38
GAL
k
2 11BETA-D-GALACTOPYRANOSE
lig 39
GLA
k
3 11ALPHA-D-GALACTOPYRANOSE
lig 40
GAL
l
1 11BETA-D-GALACTOPYRANOSE
lig 41
GLA
l
2 11ALPHA-D-GALACTOPYRANOSE
lig 42
BGC
m
1 12BETA-D-GLUCOPYRANOSE
lig 43
GAL
m
2 11BETA-D-GALACTOPYRANOSE
lig 44
GLA
m
3 11ALPHA-D-GALACTOPYRANOSE
lig 45
BGC
n
1 12BETA-D-GLUCOPYRANOSE
lig 46
GAL
n
2 11BETA-D-GALACTOPYRANOSE
lig 47
GLA
n
3 11ALPHA-D-GALACTOPYRANOSE
lig 48
BGC
o
1 12BETA-D-GLUCOPYRANOSE
lig 49
GAL
o
2 11BETA-D-GALACTOPYRANOSE
lig 50
GLA
o
3 11ALPHA-D-GALACTOPYRANOSE
lig 51
BGC
p
1 12BETA-D-GLUCOPYRANOSE
lig 52
GAL
p
2 11BETA-D-GALACTOPYRANOSE
lig 53
GLA
p
3 11ALPHA-D-GALACTOPYRANOSE
lig 54
BGC
q
1 12BETA-D-GLUCOPYRANOSE
lig 55
GAL
q
2 11BETA-D-GALACTOPYRANOSE
lig 56
GLA
q
3 11ALPHA-D-GALACTOPYRANOSE
lig 57
BGC
r
1 12BETA-D-GLUCOPYRANOSE
lig 58
GAL
r
2 11BETA-D-GALACTOPYRANOSE
lig 59
GLA
r
3 11ALPHA-D-GALACTOPYRANOSE
lig 60
BGC
s
1 12BETA-D-GLUCOPYRANOSE
lig 61
GAL
s
2 11BETA-D-GALACTOPYRANOSE
lig 62
GLA
s
3 11ALPHA-D-GALACTOPYRANOSE
lig 63
BGC
t
1 12BETA-D-GLUCOPYRANOSE
lig 64
GAL
t
2 11BETA-D-GALACTOPYRANOSE
lig 65
GLA
t
3 11ALPHA-D-GALACTOPYRANOSE
lig 66
BGC
u
1 12BETA-D-GLUCOPYRANOSE
lig 67
GAL
u
2 11BETA-D-GALACTOPYRANOSE
lig 68
GLA
u
3 11ALPHA-D-GALACTOPYRANOSE
lig 69
BGC
v
1 12BETA-D-GLUCOPYRANOSE
lig 70
GAL
v
2 11BETA-D-GALACTOPYRANOSE
lig 71
GLA
v
3 11ALPHA-D-GALACTOPYRANOSE
lig 72
CA
A
201 1CALCIUM ION
lig 73
EDO
A
205 41,2-ETHANEDIOL
lig 74
CA
B
200 1CALCIUM ION
lig 75
CA
C
200 1CALCIUM ION
lig 76
CA
D
201 1CALCIUM ION
lig 77
EDO
D
205 41,2-ETHANEDIOL
lig 78
CA
E
201 1CALCIUM ION
lig 79
EDO
E
205 41,2-ETHANEDIOL
lig 80
CA
F
200 1CALCIUM ION
lig 81
CA
G
201 1CALCIUM ION
lig 82
EDO
G
205 41,2-ETHANEDIOL
lig 83
CA
H
201 1CALCIUM ION
lig 84
EDO
H
205 41,2-ETHANEDIOL
lig 85
CA
I
201 1CALCIUM ION
lig 86
EDO
I
205 41,2-ETHANEDIOL
lig 87
EDO
I
206 41,2-ETHANEDIOL
lig 88
CA
J
200 1CALCIUM ION
lig 89
CA
K
200 1CALCIUM ION
lig 90
CA
L
201 1CALCIUM ION
lig 91
EDO
L
205 41,2-ETHANEDIOL
lig 92
CA
M
201 1CALCIUM ION
lig 93
EDO
M
205 41,2-ETHANEDIOL
lig 94
EDO
M
206 41,2-ETHANEDIOL
lig 95
CA
N
201 1CALCIUM ION
lig 96
BGC
N
204 12BETA-D-GLUCOPYRANOSE
lig 97
EDO
N
205 41,2-ETHANEDIOL
lig 98
CA
O
201 1CALCIUM ION
lig 99
EDO
O
205 41,2-ETHANEDIOL
lig 100
CA
P
200 1CALCIUM ION
lig 101
CA
Q
201 1CALCIUM ION
lig 102
EDO
Q
205 41,2-ETHANEDIOL
lig 103
EDO
Q
206 41,2-ETHANEDIOL
lig 104
CA
R
200 1CALCIUM ION
lig 105
CA
S
201 1CALCIUM ION
lig 106
EDO
S
205 41,2-ETHANEDIOL
lig 107
CA
T
200 1CALCIUM ION
lig 108
CA
U
201 1CALCIUM ION
lig 109
EDO
U
205 41,2-ETHANEDIOL
lig 110
CA
V
201 1CALCIUM ION
lig 111
EDO
V
205 41,2-ETHANEDIOL
lig 112
CA
W
201 1CALCIUM ION
lig 113
EDO
W
205 41,2-ETHANEDIOL
lig 114
EDO
W
206 41,2-ETHANEDIOL
lig 115
CA
X
201 1CALCIUM ION
lig 116
EDO
X
205 41,2-ETHANEDIOL