Analysis of Ligand-Protein Contacts in PDB entry:
2YD0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 2YD0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
1943 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
ZN
A
1946 1ZINC ION
lig 7
K
A
1947 1POTASSIUM ION
lig 8
K
A
1948 1POTASSIUM ION
lig 9
EDO
A
1949 41,2-ETHANEDIOL
lig 10
BES
A
1950 22 PENTANOIC ACID