Analysis of Ligand-Protein Contacts in PDB entry:
2YDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 2YDM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
ZN
A
1619 1ZINC ION
lig 5
CL
A
1620 1CHLORIDE ION
lig 6
CL
A
1621 1CHLORIDE ION
lig 7
NAG
A
1622 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
SLC
A
1626 14SELENO-CAPTOPRIL