Analysis of Ligand-Protein Contacts in PDB entry:
2YXU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 2YXU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
1404 1MAGNESIUM ION
lig 2
NA
A
1406 1SODIUM ION
lig 3
PO4
A
1501 5PHOSPHATE ION
lig 4
PO4
A
1505 5PHOSPHATE ION
lig 5
ATP
A
1410 31ADENOSINE-5'-TRIPHOSPHATE
lig 6
MPD
A
1011 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
A
1013 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
MPD
A
1037 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
MG
B
2404 1MAGNESIUM ION
lig 10
NA
B
2406 1SODIUM ION
lig 11
PO4
B
1503 5PHOSPHATE ION
lig 12
PO4
B
1517 5PHOSPHATE ION
lig 13
PO4
B
1527 5PHOSPHATE ION
lig 14
ATP
B
2410 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
MPD
B
1015 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
MPD
B
1019 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
MPD
B
1021 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
MPD
B
1023 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
MPD
B
1025 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
MPD
B
1029 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 21
MPD
B
1031 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
MPD
B
1039 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
B
1041 8(4S)-2-METHYL-2,4-PENTANEDIOL