Analysis of Ligand-Protein Contacts in PDB entry:
363D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 102 ligands in PDB entry 363D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
C42
A
1 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 2
G38
A
2 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 3
C42
A
3 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 4
G38
A
4 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 5
A43
A
5 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 6
A43
A
6 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 7
NYM
A
7 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 8
NYM
A
8 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 9
C42
A
9 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 10
G38
A
10 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 11
C42
A
11 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 12
C42
B
13 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 13
G38
B
14 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 14
C42
B
15 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 15
G38
B
16 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 16
A43
B
17 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 17
A43
B
18 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 18
NYM
B
19 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 19
NYM
B
20 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 20
C42
B
21 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 21
G38
B
22 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 22
C42
B
23 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 23
C42
C
101 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 24
G38
C
102 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 25
C42
C
103 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 26
G38
C
104 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 27
A43
C
105 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 28
A43
C
106 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 29
NYM
C
107 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 30
NYM
C
108 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 31
C42
C
109 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 32
G38
C
110 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 33
C42
C
111 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 34
C42
D
113 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 35
G38
D
114 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 36
C42
D
115 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 37
G38
D
116 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 38
A43
D
117 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 39
A43
D
118 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 40
NYM
D
119 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 41
NYM
D
120 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 42
C42
D
121 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 43
G38
D
122 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 44
C42
D
123 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 45
C42
E
201 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 46
G38
E
202 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 47
C42
E
203 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 48
G38
E
204 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 49
A43
E
205 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 50
A43
E
206 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 51
NYM
E
207 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 52
NYM
E
208 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 53
C42
E
209 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 54
G38
E
210 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 55
C42
E
211 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 56
C42
F
213 163'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 57
G38
F
214 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 58
C42
F
215 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 59
G38
F
216 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 60
A43
F
217 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 61
A43
F
218 213'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE
lig 62
NYM
F
219 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 63
NYM
F
220 203'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE
lig 64
C42
F
221 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 65
G38
F
222 223'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHA
lig 66
C42
F
223 193'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 67
NH4
A
237 1AMMONIUM ION
lig 68
NH4
A
239 1AMMONIUM ION
lig 69
CL
A
255 1CHLORIDE ION
lig 70
NH4
A
226 1AMMONIUM ION
lig 71
NH4
A
228 1AMMONIUM ION
lig 72
CL
A
250 1CHLORIDE ION
lig 73
NH4
B
238 1AMMONIUM ION
lig 74
NH4
B
240 1AMMONIUM ION
lig 75
CL
B
256 1CHLORIDE ION
lig 76
NH4
B
225 1AMMONIUM ION
lig 77
NH4
B
227 1AMMONIUM ION
lig 78
CL
B
249 1CHLORIDE ION
lig 79
NH4
C
243 1AMMONIUM ION
lig 80
NH4
C
245 1AMMONIUM ION
lig 81
CL
C
259 1CHLORIDE ION
lig 82
NH4
C
244 1AMMONIUM ION
lig 83
NH4
C
248 1AMMONIUM ION
lig 84
CL
C
260 1CHLORIDE ION
lig 85
NH4
D
242 1AMMONIUM ION
lig 86
NH4
D
246 1AMMONIUM ION
lig 87
CL
D
258 1CHLORIDE ION
lig 88
NH4
D
241 1AMMONIUM ION
lig 89
NH4
D
247 1AMMONIUM ION
lig 90
CL
D
257 1CHLORIDE ION
lig 91
NH4
E
229 1AMMONIUM ION
lig 92
NH4
E
235 1AMMONIUM ION
lig 93
CL
E
251 1CHLORIDE ION
lig 94
NH4
E
230 1AMMONIUM ION
lig 95
NH4
E
234 1AMMONIUM ION
lig 96
CL
E
252 1CHLORIDE ION
lig 97
NH4
F
232 1AMMONIUM ION
lig 98
NH4
F
231 1AMMONIUM ION
lig 99
NH4
F
236 1AMMONIUM ION
lig 100
CL
F
254 1CHLORIDE ION
lig 101
NH4
F
233 1AMMONIUM ION
lig 102
CL
F
253 1CHLORIDE ION