Analysis of Ligand-Protein Contacts in PDB entry:
3D5E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3D5E. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DEP
A
473 8DIETHYL PHOSPHONATE
lig 2
FMT
A
2 3FORMIC ACID
lig 3
FMT
A
3 3FORMIC ACID
lig 4
FMT
A
4 3FORMIC ACID
lig 5
FMT
A
5 3FORMIC ACID
lig 6
FMT
A
11 3FORMIC ACID
lig 7
FMT
A
12 3FORMIC ACID
lig 8
FMT
A
16 3FORMIC ACID
lig 9
DEP
B
473 8DIETHYL PHOSPHONATE
lig 10
FMT
B
1 3FORMIC ACID
lig 11
FMT
B
6 3FORMIC ACID
lig 12
FMT
B
7 3FORMIC ACID
lig 13
FMT
B
8 3FORMIC ACID
lig 14
FMT
B
9 3FORMIC ACID
lig 15
FMT
B
10 3FORMIC ACID
lig 16
FMT
B
13 3FORMIC ACID
lig 17
FMT
B
14 3FORMIC ACID
lig 18
FMT
B
15 3FORMIC ACID