Analysis of Ligand-Protein Contacts in PDB entry:
3GBN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 3GBN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
A
330 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
EDO
A
331 41,2-ETHANEDIOL
lig 7
GOL
A
332 6GLYCEROL
lig 8
ETX
A
333 62-ETHOXYETHANOL
lig 9
NAG
B
180 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
GOL
B
181 6GLYCEROL
lig 11
CL
B
182 1CHLORIDE ION
lig 12
EDO
B
183 41,2-ETHANEDIOL
lig 13
EDO
B
184 41,2-ETHANEDIOL
lig 14
EDO
B
185 41,2-ETHANEDIOL
lig 15
UNL
B
186 14UNKNOWN LIGAND
lig 16
EDO
H
228 41,2-ETHANEDIOL