Analysis of Ligand-Protein Contacts in PDB entry:
3PDR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 3PDR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
K
X
1 1POTASSIUM ION
lig 2
K
X
2 1POTASSIUM ION
lig 3
K
X
3 1POTASSIUM ION
lig 4
MN
X
176 1MANGANESE (II) ION
lig 5
MN
X
177 1MANGANESE (II) ION
lig 6
MN
X
178 1MANGANESE (II) ION
lig 7
MN
X
4 1MANGANESE (II) ION
lig 8
MN
X
7 1MANGANESE (II) ION
lig 9
MN
X
9 1MANGANESE (II) ION
lig 10
MN
X
10 1MANGANESE (II) ION
lig 11
MN
X
12 1MANGANESE (II) ION
lig 12
MN
X
13 1MANGANESE (II) ION
lig 13
MN
X
14 1MANGANESE (II) ION
lig 14
MN
X
179 1MANGANESE (II) ION
lig 15
MN
X
180 1MANGANESE (II) ION
lig 16
K
A
1 1POTASSIUM ION
lig 17
K
A
2 1POTASSIUM ION
lig 18
K
A
3 1POTASSIUM ION
lig 19
MN
A
176 1MANGANESE (II) ION
lig 20
MN
A
177 1MANGANESE (II) ION
lig 21
MN
A
178 1MANGANESE (II) ION
lig 22
MN
A
4 1MANGANESE (II) ION
lig 23
MN
A
5 1MANGANESE (II) ION
lig 24
MN
A
6 1MANGANESE (II) ION
lig 25
MN
A
7 1MANGANESE (II) ION
lig 26
MN
A
9 1MANGANESE (II) ION
lig 27
MN
A
10 1MANGANESE (II) ION
lig 28
MN
A
11 1MANGANESE (II) ION
lig 29
MN
A
12 1MANGANESE (II) ION
lig 30
MN
A
13 1MANGANESE (II) ION
lig 31
MN
A
179 1MANGANESE (II) ION