Analysis of Ligand-Protein Contacts in PDB entry:
3DLS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3DLS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
7 1MAGNESIUM ION
lig 2
MG
A
8 1MAGNESIUM ION
lig 3
MG
A
20 1MAGNESIUM ION
lig 4
MG
A
25 1MAGNESIUM ION
lig 5
ADP
A
1 27ADENOSINE-5'-DIPHOSPHATE
lig 6
MG
B
9 1MAGNESIUM ION
lig 7
MG
B
10 1MAGNESIUM ION
lig 8
MG
B
19 1MAGNESIUM ION
lig 9
MG
B
24 1MAGNESIUM ION
lig 10
ADP
B
2 27ADENOSINE-5'-DIPHOSPHATE
lig 11
MG
C
11 1MAGNESIUM ION
lig 12
MG
C
12 1MAGNESIUM ION
lig 13
MG
C
21 1MAGNESIUM ION
lig 14
MG
C
22 1MAGNESIUM ION
lig 15
ADP
C
3 27ADENOSINE-5'-DIPHOSPHATE
lig 16
MG
D
13 1MAGNESIUM ION
lig 17
MG
D
14 1MAGNESIUM ION
lig 18
MG
D
23 1MAGNESIUM ION
lig 19
ADP
D
4 27ADENOSINE-5'-DIPHOSPHATE
lig 20
MG
E
15 1MAGNESIUM ION
lig 21
MG
E
16 1MAGNESIUM ION
lig 22
ADP
E
5 27ADENOSINE-5'-DIPHOSPHATE
lig 23
MG
F
17 1MAGNESIUM ION
lig 24
MG
F
18 1MAGNESIUM ION
lig 25
ADP
F
6 27ADENOSINE-5'-DIPHOSPHATE