Analysis of Ligand-Protein Contacts in PDB entry:
3GIL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3GIL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
2DT
D
814 193'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE
lig 2
8OG
E
906 238-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
lig 3
2DT
H
1814 193'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE
lig 4
8OG
J
1906 238-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
lig 5
DGT
A
414 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 6
CA
A
415 1CALCIUM ION
lig 7
CA
A
416 1CALCIUM ION
lig 8
CA
A
417 1CALCIUM ION
lig 9
DGT
B
1414 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 10
CA
B
1415 1CALCIUM ION
lig 11
CA
B
1416 1CALCIUM ION
lig 12
CA
B
1417 1CALCIUM ION