Analysis of Ligand-Protein Contacts in PDB entry:
3GXP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 3GXP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
SO4
A
1 5SULFATE ION
lig 13
GLA
A
3681 12ALPHA-D-GALACTOPYRANOSE
lig 14
TAM
A
6744 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 15
NAG
A
498 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
430 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
SO4
B
2 5SULFATE ION
lig 18
SO4
B
3 5SULFATE ION
lig 19
SO4
B
4 5SULFATE ION
lig 20
MAN
B
694 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
B
695 11ALPHA-D-MANNOPYRANOSE
lig 22
GLA
B
3681 12ALPHA-D-GALACTOPYRANOSE