Analysis of Ligand-Protein Contacts in PDB entry:
3GXT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 3GXT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
E
1 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
2 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
MAN
H
3 11ALPHA-D-MANNOPYRANOSE
lig 16
SO4
A
1 5SULFATE ION
lig 17
SO4
A
2 5SULFATE ION
lig 18
SO4
A
5 5SULFATE ION
lig 19
NOJ
A
430 111-DEOXYNOJIRIMYCIN
lig 20
NAG
B
639 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
SO4
B
3 5SULFATE ION
lig 22
SO4
B
4 5SULFATE ION
lig 23
NOJ
B
1 111-DEOXYNOJIRIMYCIN