Analysis of Ligand-Protein Contacts in PDB entry:
3JCU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 322 ligands in PDB entry 3JCU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OEX
A
401 10CA-MN4-O5 CLUSTER
lig 2
FE2
A
402 1FE (II) ION
lig 3
CL
A
403 1CHLORIDE ION
lig 4
CL
A
404 1CHLORIDE ION
lig 5
CLA
A
405 65CHLOROPHYLL A
lig 6
CLA
A
406 65CHLOROPHYLL A
lig 7
CLA
A
407 49CHLOROPHYLL A
lig 8
PHO
A
408 64PHEOPHYTIN A
lig 9
PHO
A
409 64PHEOPHYTIN A
lig 10
CLA
A
410 60CHLOROPHYLL A
lig 11
BCR
A
411 40BETA-CAROTENE
lig 12
SQD
A
412 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 13
LMG
A
413 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 14
SQD
A
418 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 15
CLA
B
602 65CHLOROPHYLL A
lig 16
CLA
B
603 65CHLOROPHYLL A
lig 17
CLA
B
604 65CHLOROPHYLL A
lig 18
CLA
B
605 65CHLOROPHYLL A
lig 19
CLA
B
606 65CHLOROPHYLL A
lig 20
CLA
B
607 65CHLOROPHYLL A
lig 21
CLA
B
608 65CHLOROPHYLL A
lig 22
CLA
B
609 65CHLOROPHYLL A
lig 23
CLA
B
610 65CHLOROPHYLL A
lig 24
CLA
B
611 65CHLOROPHYLL A
lig 25
CLA
B
612 65CHLOROPHYLL A
lig 26
CLA
B
613 65CHLOROPHYLL A
lig 27
CLA
B
614 65CHLOROPHYLL A
lig 28
CLA
B
615 65CHLOROPHYLL A
lig 29
CLA
B
616 65CHLOROPHYLL A
lig 30
BCR
B
618 40BETA-CAROTENE
lig 31
CLA
B
617 65CHLOROPHYLL A
lig 32
BCR
B
619 40BETA-CAROTENE
lig 33
BCR
B
620 40BETA-CAROTENE
lig 34
SQD
B
621 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 35
LMG
B
622 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 36
CLA
C
502 65CHLOROPHYLL A
lig 37
CLA
C
503 65CHLOROPHYLL A
lig 38
CLA
C
501 65CHLOROPHYLL A
lig 39
CLA
C
504 65CHLOROPHYLL A
lig 40
CLA
C
505 65CHLOROPHYLL A
lig 41
CLA
C
506 65CHLOROPHYLL A
lig 42
CLA
C
507 65CHLOROPHYLL A
lig 43
CLA
C
508 65CHLOROPHYLL A
lig 44
CLA
C
509 65CHLOROPHYLL A
lig 45
CLA
C
510 65CHLOROPHYLL A
lig 46
CLA
C
511 65CHLOROPHYLL A
lig 47
CLA
C
512 65CHLOROPHYLL A
lig 48
CLA
C
513 49CHLOROPHYLL A
lig 49
BCR
C
515 40BETA-CAROTENE
lig 50
BCR
C
516 40BETA-CAROTENE
lig 51
BCR
C
514 40BETA-CAROTENE
lig 52
BCR
C
517 40BETA-CAROTENE
lig 53
DGD
C
518 55DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 54
DGD
C
519 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 55
LMG
C
521 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 56
DGD
C
520 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 57
BCT
D
401 4BICARBONATE ION
lig 58
CLA
D
402 65CHLOROPHYLL A
lig 59
CLA
D
403 65CHLOROPHYLL A
lig 60
BCR
D
404 40BETA-CAROTENE
lig 61
PL9
D
405 55 BENZOQUINONE
lig 62
LHG
D
408 431,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 63
LHG
D
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 64
LHG
D
410 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 65
LMG
D
411 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 66
HEM
F
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 67
CHL
G
601 66CHLOROPHYLL B
lig 68
CLA
G
602 65CHLOROPHYLL A
lig 69
CLA
G
603 49CHLOROPHYLL A
lig 70
CLA
G
604 49CHLOROPHYLL A
lig 71
CHL
G
605 48CHLOROPHYLL B
lig 72
CHL
G
606 50CHLOROPHYLL B
lig 73
CHL
G
607 50CHLOROPHYLL B
lig 74
CHL
G
608 50CHLOROPHYLL B
lig 75
CHL
G
609 50CHLOROPHYLL B
lig 76
CLA
G
610 65CHLOROPHYLL A
lig 77
CLA
G
611 49CHLOROPHYLL A
lig 78
CLA
G
612 49CHLOROPHYLL A
lig 79
CLA
G
613 49CHLOROPHYLL A
lig 80
CLA
G
614 49CHLOROPHYLL A
lig 81
LUT
G
1620 42 CAROTENE-3,3'-DIOL
lig 82
LUT
G
1621 42 CAROTENE-3,3'-DIOL
lig 83
XAT
G
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 84
NEX
G
1623 44 DIOL
lig 85
LHG
G
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 86
BCR
H
101 40BETA-CAROTENE
lig 87
DGD
H
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 88
LHG
L
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 89
CHL
N
601 50CHLOROPHYLL B
lig 90
CLA
N
602 65CHLOROPHYLL A
lig 91
CLA
N
603 49CHLOROPHYLL A
lig 92
CLA
N
604 49CHLOROPHYLL A
lig 93
CHL
N
605 48CHLOROPHYLL B
lig 94
CHL
N
606 50CHLOROPHYLL B
lig 95
CHL
N
607 66CHLOROPHYLL B
lig 96
CHL
N
608 50CHLOROPHYLL B
lig 97
CHL
N
609 50CHLOROPHYLL B
lig 98
CLA
N
610 65CHLOROPHYLL A
lig 99
CLA
N
611 49CHLOROPHYLL A
lig 100
CLA
N
612 49CHLOROPHYLL A
lig 101
CLA
N
613 49CHLOROPHYLL A
lig 102
CLA
N
614 49CHLOROPHYLL A
lig 103
LUT
N
1620 42 CAROTENE-3,3'-DIOL
lig 104
LUT
N
1621 42 CAROTENE-3,3'-DIOL
lig 105
XAT
N
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 106
NEX
N
1623 44 DIOL
lig 107
LHG
N
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 108
CLA
R
601 49CHLOROPHYLL A
lig 109
CLA
R
602 65CHLOROPHYLL A
lig 110
CLA
R
603 49CHLOROPHYLL A
lig 111
CLA
R
604 49CHLOROPHYLL A
lig 112
CHL
R
606 50CHLOROPHYLL B
lig 113
CHL
R
607 50CHLOROPHYLL B
lig 114
CHL
R
608 50CHLOROPHYLL B
lig 115
CLA
R
609 49CHLOROPHYLL A
lig 116
CLA
R
610 65CHLOROPHYLL A
lig 117
CLA
R
611 49CHLOROPHYLL A
lig 118
CLA
R
612 49CHLOROPHYLL A
lig 119
CLA
R
613 49CHLOROPHYLL A
lig 120
CLA
R
616 49CHLOROPHYLL A
lig 121
LUT
R
620 42 CAROTENE-3,3'-DIOL
lig 122
XAT
R
622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 123
NEX
R
623 44 DIOL
lig 124
LHG
R
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 125
CHL
S
601 52CHLOROPHYLL B
lig 126
CLA
S
602 49CHLOROPHYLL A
lig 127
CLA
S
603 49CHLOROPHYLL A
lig 128
CLA
S
604 49CHLOROPHYLL A
lig 129
CHL
S
606 50CHLOROPHYLL B
lig 130
CHL
S
607 50CHLOROPHYLL B
lig 131
CHL
S
608 49CHLOROPHYLL B
lig 132
CLA
S
609 49CHLOROPHYLL A
lig 133
CLA
S
610 49CHLOROPHYLL A
lig 134
CLA
S
611 49CHLOROPHYLL A
lig 135
CLA
S
612 49CHLOROPHYLL A
lig 136
CLA
S
613 49CHLOROPHYLL A
lig 137
CLA
S
614 49CHLOROPHYLL A
lig 138
LUT
S
1620 42 CAROTENE-3,3'-DIOL
lig 139
LUT
S
1621 42 CAROTENE-3,3'-DIOL
lig 140
NEX
S
1623 44 DIOL
lig 141
LHG
S
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 142
CHL
Y
601 66CHLOROPHYLL B
lig 143
CLA
Y
602 65CHLOROPHYLL A
lig 144
CLA
Y
603 49CHLOROPHYLL A
lig 145
CLA
Y
604 49CHLOROPHYLL A
lig 146
CHL
Y
605 48CHLOROPHYLL B
lig 147
CHL
Y
606 50CHLOROPHYLL B
lig 148
CHL
Y
607 50CHLOROPHYLL B
lig 149
CHL
Y
608 50CHLOROPHYLL B
lig 150
CHL
Y
609 66CHLOROPHYLL B
lig 151
CLA
Y
610 65CHLOROPHYLL A
lig 152
CLA
Y
611 65CHLOROPHYLL A
lig 153
CLA
Y
612 65CHLOROPHYLL A
lig 154
CLA
Y
613 65CHLOROPHYLL A
lig 155
CLA
Y
614 49CHLOROPHYLL A
lig 156
LUT
Y
1620 42 CAROTENE-3,3'-DIOL
lig 157
LUT
Y
1621 42 CAROTENE-3,3'-DIOL
lig 158
XAT
Y
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 159
NEX
Y
1623 44 DIOL
lig 160
LHG
Y
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 161
LMG
Z
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 162
OEX
a
401 10CA-MN4-O5 CLUSTER
lig 163
FE2
a
402 1FE (II) ION
lig 164
CL
a
403 1CHLORIDE ION
lig 165
CL
a
404 1CHLORIDE ION
lig 166
CLA
a
405 65CHLOROPHYLL A
lig 167
CLA
a
406 65CHLOROPHYLL A
lig 168
CLA
a
407 49CHLOROPHYLL A
lig 169
PHO
a
408 64PHEOPHYTIN A
lig 170
PHO
a
409 64PHEOPHYTIN A
lig 171
CLA
a
410 60CHLOROPHYLL A
lig 172
BCR
a
411 40BETA-CAROTENE
lig 173
SQD
a
412 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 174
LMG
a
413 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 175
SQD
a
418 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 176
CLA
b
602 65CHLOROPHYLL A
lig 177
CLA
b
603 65CHLOROPHYLL A
lig 178
CLA
b
604 65CHLOROPHYLL A
lig 179
CLA
b
605 65CHLOROPHYLL A
lig 180
CLA
b
606 65CHLOROPHYLL A
lig 181
CLA
b
607 65CHLOROPHYLL A
lig 182
CLA
b
608 65CHLOROPHYLL A
lig 183
CLA
b
609 65CHLOROPHYLL A
lig 184
CLA
b
610 65CHLOROPHYLL A
lig 185
CLA
b
611 65CHLOROPHYLL A
lig 186
CLA
b
612 65CHLOROPHYLL A
lig 187
CLA
b
613 65CHLOROPHYLL A
lig 188
CLA
b
614 65CHLOROPHYLL A
lig 189
CLA
b
615 65CHLOROPHYLL A
lig 190
CLA
b
616 65CHLOROPHYLL A
lig 191
BCR
b
618 40BETA-CAROTENE
lig 192
CLA
b
617 65CHLOROPHYLL A
lig 193
BCR
b
619 40BETA-CAROTENE
lig 194
BCR
b
620 40BETA-CAROTENE
lig 195
SQD
b
621 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 196
LMG
b
622 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 197
CLA
c
502 65CHLOROPHYLL A
lig 198
CLA
c
503 65CHLOROPHYLL A
lig 199
CLA
c
501 65CHLOROPHYLL A
lig 200
CLA
c
504 65CHLOROPHYLL A
lig 201
CLA
c
505 65CHLOROPHYLL A
lig 202
CLA
c
506 65CHLOROPHYLL A
lig 203
CLA
c
507 65CHLOROPHYLL A
lig 204
CLA
c
508 65CHLOROPHYLL A
lig 205
CLA
c
509 65CHLOROPHYLL A
lig 206
CLA
c
510 65CHLOROPHYLL A
lig 207
CLA
c
511 65CHLOROPHYLL A
lig 208
CLA
c
512 65CHLOROPHYLL A
lig 209
CLA
c
513 49CHLOROPHYLL A
lig 210
BCR
c
515 40BETA-CAROTENE
lig 211
BCR
c
516 40BETA-CAROTENE
lig 212
BCR
c
514 40BETA-CAROTENE
lig 213
DGD
c
518 55DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 214
BCR
c
517 40BETA-CAROTENE
lig 215
DGD
c
519 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 216
DGD
c
520 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 217
LMG
c
521 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 218
BCT
d
401 4BICARBONATE ION
lig 219
CLA
d
402 65CHLOROPHYLL A
lig 220
CLA
d
403 65CHLOROPHYLL A
lig 221
BCR
d
404 40BETA-CAROTENE
lig 222
LHG
d
408 431,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 223
PL9
d
405 55 BENZOQUINONE
lig 224
LHG
d
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 225
LHG
d
410 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 226
LMG
d
411 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 227
HEM
f
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 228
CHL
g
601 66CHLOROPHYLL B
lig 229
CLA
g
602 65CHLOROPHYLL A
lig 230
CLA
g
603 49CHLOROPHYLL A
lig 231
CLA
g
604 49CHLOROPHYLL A
lig 232
CHL
g
605 48CHLOROPHYLL B
lig 233
CHL
g
606 50CHLOROPHYLL B
lig 234
CHL
g
607 50CHLOROPHYLL B
lig 235
CHL
g
608 50CHLOROPHYLL B
lig 236
CHL
g
609 50CHLOROPHYLL B
lig 237
CLA
g
610 65CHLOROPHYLL A
lig 238
CLA
g
611 49CHLOROPHYLL A
lig 239
CLA
g
612 49CHLOROPHYLL A
lig 240
CLA
g
613 49CHLOROPHYLL A
lig 241
CLA
g
614 49CHLOROPHYLL A
lig 242
LUT
g
1620 42 CAROTENE-3,3'-DIOL
lig 243
LUT
g
1621 42 CAROTENE-3,3'-DIOL
lig 244
XAT
g
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 245
NEX
g
1623 44 DIOL
lig 246
LHG
g
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 247
BCR
h
101 40BETA-CAROTENE
lig 248
DGD
h
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 249
LHG
l
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 250
CHL
n
601 50CHLOROPHYLL B
lig 251
CLA
n
602 65CHLOROPHYLL A
lig 252
CLA
n
603 49CHLOROPHYLL A
lig 253
CLA
n
604 49CHLOROPHYLL A
lig 254
CHL
n
605 48CHLOROPHYLL B
lig 255
CHL
n
606 50CHLOROPHYLL B
lig 256
CHL
n
607 66CHLOROPHYLL B
lig 257
CHL
n
608 50CHLOROPHYLL B
lig 258
CHL
n
609 50CHLOROPHYLL B
lig 259
CLA
n
610 65CHLOROPHYLL A
lig 260
CLA
n
611 49CHLOROPHYLL A
lig 261
CLA
n
612 49CHLOROPHYLL A
lig 262
CLA
n
613 49CHLOROPHYLL A
lig 263
CLA
n
614 49CHLOROPHYLL A
lig 264
LUT
n
1620 42 CAROTENE-3,3'-DIOL
lig 265
LUT
n
1621 42 CAROTENE-3,3'-DIOL
lig 266
XAT
n
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 267
NEX
n
1623 44 DIOL
lig 268
LHG
n
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 269
CLA
r
601 49CHLOROPHYLL A
lig 270
CLA
r
602 65CHLOROPHYLL A
lig 271
CLA
r
603 49CHLOROPHYLL A
lig 272
CLA
r
604 49CHLOROPHYLL A
lig 273
CHL
r
606 50CHLOROPHYLL B
lig 274
CHL
r
607 50CHLOROPHYLL B
lig 275
CHL
r
608 50CHLOROPHYLL B
lig 276
CLA
r
609 49CHLOROPHYLL A
lig 277
CLA
r
610 65CHLOROPHYLL A
lig 278
CLA
r
611 49CHLOROPHYLL A
lig 279
CLA
r
612 49CHLOROPHYLL A
lig 280
CLA
r
613 49CHLOROPHYLL A
lig 281
CLA
r
616 49CHLOROPHYLL A
lig 282
LUT
r
620 42 CAROTENE-3,3'-DIOL
lig 283
XAT
r
622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 284
NEX
r
623 44 DIOL
lig 285
LHG
r
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 286
CHL
s
601 52CHLOROPHYLL B
lig 287
CLA
s
602 49CHLOROPHYLL A
lig 288
CLA
s
603 49CHLOROPHYLL A
lig 289
CLA
s
604 49CHLOROPHYLL A
lig 290
CHL
s
606 50CHLOROPHYLL B
lig 291
CHL
s
607 50CHLOROPHYLL B
lig 292
CHL
s
608 49CHLOROPHYLL B
lig 293
CLA
s
609 49CHLOROPHYLL A
lig 294
CLA
s
610 49CHLOROPHYLL A
lig 295
CLA
s
611 49CHLOROPHYLL A
lig 296
CLA
s
612 49CHLOROPHYLL A
lig 297
CLA
s
613 49CHLOROPHYLL A
lig 298
CLA
s
614 49CHLOROPHYLL A
lig 299
LUT
s
1620 42 CAROTENE-3,3'-DIOL
lig 300
LUT
s
1621 42 CAROTENE-3,3'-DIOL
lig 301
NEX
s
1623 44 DIOL
lig 302
LHG
s
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 303
CHL
y
601 66CHLOROPHYLL B
lig 304
CLA
y
602 65CHLOROPHYLL A
lig 305
CLA
y
603 49CHLOROPHYLL A
lig 306
CLA
y
604 49CHLOROPHYLL A
lig 307
CHL
y
605 48CHLOROPHYLL B
lig 308
CHL
y
606 50CHLOROPHYLL B
lig 309
CHL
y
607 50CHLOROPHYLL B
lig 310
CHL
y
608 50CHLOROPHYLL B
lig 311
CHL
y
609 66CHLOROPHYLL B
lig 312
CLA
y
610 65CHLOROPHYLL A
lig 313
CLA
y
611 65CHLOROPHYLL A
lig 314
CLA
y
612 65CHLOROPHYLL A
lig 315
CLA
y
613 65CHLOROPHYLL A
lig 316
CLA
y
614 49CHLOROPHYLL A
lig 317
LUT
y
1620 42 CAROTENE-3,3'-DIOL
lig 318
LUT
y
1621 42 CAROTENE-3,3'-DIOL
lig 319
XAT
y
1622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 320
NEX
y
1623 44 DIOL
lig 321
LHG
y
2630 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 322
LMG
z
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE