Analysis of Ligand-Protein Contacts in PDB entry:
3KEU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3KEU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
400 1MAGNESIUM ION
lig 2
MG
A
401 1MAGNESIUM ION
lig 3
NA
A
402 1SODIUM ION
lig 4
ATP
A
407 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
PLP
A
500 16PYRIDOXAL-5'-PHOSPHATE
lig 6
MPD
A
512 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
A
516 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
SO4
A
524 5SULFATE ION
lig 9
SO4
A
528 5SULFATE ION
lig 10
SO4
A
538 5SULFATE ION
lig 11
MG
B
404 1MAGNESIUM ION
lig 12
MG
B
405 1MAGNESIUM ION
lig 13
NA
B
406 1SODIUM ION
lig 14
ATP
B
409 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
PLP
B
500 16PYRIDOXAL-5'-PHOSPHATE
lig 16
MPD
B
510 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
MPD
B
514 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
MPD
B
518 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
MPD
B
520 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
MPD
B
522 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 21
SO4
B
526 5SULFATE ION
lig 22
SO4
B
530 5SULFATE ION
lig 23
SO4
B
532 5SULFATE ION
lig 24
SO4
B
534 5SULFATE ION
lig 25
SO4
B
536 5SULFATE ION