Analysis of Ligand-Protein Contacts in PDB entry:
3T4F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 54 ligands in PDB entry 3T4F. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
HYP
A
2 84-HYDROXYPROLINE
lig 3
HYP
A
5 84-HYDROXYPROLINE
lig 4
HYP
A
8 84-HYDROXYPROLINE
lig 5
HYP
A
14 84-HYDROXYPROLINE
lig 6
HYP
A
17 84-HYDROXYPROLINE
lig 7
HYP
A
20 84-HYDROXYPROLINE
lig 8
HYP
A
23 84-HYDROXYPROLINE
lig 9
NH2
A
25 1AMINO GROUP
lig 10
ACE
B
0 3ACETYL GROUP
lig 11
HYP
B
2 84-HYDROXYPROLINE
lig 12
HYP
B
5 84-HYDROXYPROLINE
lig 13
HYP
B
8 84-HYDROXYPROLINE
lig 14
HYP
B
14 84-HYDROXYPROLINE
lig 15
HYP
B
17 84-HYDROXYPROLINE
lig 16
HYP
B
20 84-HYDROXYPROLINE
lig 17
HYP
B
23 84-HYDROXYPROLINE
lig 18
NH2
B
25 1AMINO GROUP
lig 19
ACE
C
0 3ACETYL GROUP
lig 20
HYP
C
2 84-HYDROXYPROLINE
lig 21
HYP
C
5 84-HYDROXYPROLINE
lig 22
HYP
C
8 84-HYDROXYPROLINE
lig 23
HYP
C
14 84-HYDROXYPROLINE
lig 24
HYP
C
17 84-HYDROXYPROLINE
lig 25
HYP
C
20 84-HYDROXYPROLINE
lig 26
HYP
C
23 84-HYDROXYPROLINE
lig 27
NH2
C
25 1AMINO GROUP
lig 28
ACE
D
0 3ACETYL GROUP
lig 29
HYP
D
2 84-HYDROXYPROLINE
lig 30
HYP
D
5 84-HYDROXYPROLINE
lig 31
HYP
D
8 84-HYDROXYPROLINE
lig 32
HYP
D
14 84-HYDROXYPROLINE
lig 33
HYP
D
17 84-HYDROXYPROLINE
lig 34
HYP
D
20 84-HYDROXYPROLINE
lig 35
HYP
D
23 84-HYDROXYPROLINE
lig 36
NH2
D
25 1AMINO GROUP
lig 37
ACE
E
0 3ACETYL GROUP
lig 38
HYP
E
2 84-HYDROXYPROLINE
lig 39
HYP
E
5 84-HYDROXYPROLINE
lig 40
HYP
E
8 84-HYDROXYPROLINE
lig 41
HYP
E
14 84-HYDROXYPROLINE
lig 42
HYP
E
17 84-HYDROXYPROLINE
lig 43
HYP
E
20 84-HYDROXYPROLINE
lig 44
HYP
E
23 84-HYDROXYPROLINE
lig 45
NH2
E
25 1AMINO GROUP
lig 46
ACE
F
0 3ACETYL GROUP
lig 47
HYP
F
2 84-HYDROXYPROLINE
lig 48
HYP
F
5 84-HYDROXYPROLINE
lig 49
HYP
F
8 84-HYDROXYPROLINE
lig 50
HYP
F
14 84-HYDROXYPROLINE
lig 51
HYP
F
17 84-HYDROXYPROLINE
lig 52
HYP
F
20 84-HYDROXYPROLINE
lig 53
HYP
F
23 84-HYDROXYPROLINE
lig 54
NH2
F
25 1AMINO GROUP