Analysis of Ligand-Protein Contacts in PDB entry:
3UP1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 3UP1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
A
903 10ALPHA-L-FUCOPYRANOSE
lig 6
SO4
A
904 5SULFATE ION
lig 7
SO4
A
905 5SULFATE ION
lig 8
GOL
A
906 6GLYCEROL
lig 9
FUC
B
303 10ALPHA-L-FUCOPYRANOSE
lig 10
NGA
B
304 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 11
SO4
B
305 5SULFATE ION
lig 12
SO4
B
306 5SULFATE ION
lig 13
SO4
B
307 5SULFATE ION
lig 14
GOL
B
308 6GLYCEROL
lig 15
GOL
B
309 6GLYCEROL
lig 16
GOL
B
310 6GLYCEROL