Analysis of Ligand-Protein Contacts in PDB entry:
3VAL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 3VAL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BRU
E
5 205-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 2
BRU
H
5 205-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 3
BRU
K
5 205-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 4
BRU
P
5 205-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 5
DIO
A
401 61,4-DIETHYLENE DIOXIDE
lig 6
SO4
A
402 5SULFATE ION
lig 7
SO4
A
403 5SULFATE ION
lig 8
DIO
B
401 61,4-DIETHYLENE DIOXIDE
lig 9
SO4
B
402 5SULFATE ION
lig 10
SO4
B
403 5SULFATE ION
lig 11
DIO
D
401 61,4-DIETHYLENE DIOXIDE
lig 12
SO4
D
402 5SULFATE ION
lig 13
SO4
D
403 5SULFATE ION
lig 14
SO4
D
404 5SULFATE ION
lig 15
DIO
I
401 61,4-DIETHYLENE DIOXIDE
lig 16
SO4
I
402 5SULFATE ION
lig 17
SO4
I
403 5SULFATE ION
lig 18
SO4
I
404 5SULFATE ION
lig 19
SO4
H
101 5SULFATE ION