Analysis of Ligand-Protein Contacts in PDB entry:
4IL6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 267 ligands in PDB entry 4IL6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
I
1 10N-FORMYLMETHIONINE
lig 2
FME
M
1 10N-FORMYLMETHIONINE
lig 3
FME
T
1 10N-FORMYLMETHIONINE
lig 4
FME
Z
1 10N-FORMYLMETHIONINE
lig 5
FME
i
1 10N-FORMYLMETHIONINE
lig 6
FME
m
1 10N-FORMYLMETHIONINE
lig 7
FME
t
1 10N-FORMYLMETHIONINE
lig 8
FME
z
1 10N-FORMYLMETHIONINE
lig 9
OER
A
1001 10SR-MN4-O5 CLUSTER
lig 10
FE2
A
1002 1FE (II) ION
lig 11
CL
A
1003 1CHLORIDE ION
lig 12
CL
A
1004 1CHLORIDE ION
lig 13
CLA
A
1005 65CHLOROPHYLL A
lig 14
CLA
A
1006 65CHLOROPHYLL A
lig 15
PHO
A
1007 64PHEOPHYTIN A
lig 16
CLA
A
1008 65CHLOROPHYLL A
lig 17
BCR
A
1009 40BETA-CAROTENE
lig 18
PL9
A
1010 55 BENZOQUINONE
lig 19
SQD
A
1011 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 20
LMG
A
1012 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 21
DMS
A
1013 4DIMETHYL SULFOXIDE
lig 22
DMS
A
1014 4DIMETHYL SULFOXIDE
lig 23
UNL
A
1015 28UNKNOWN LIGAND
lig 24
SQD
A
1016 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 25
LMT
A
1017 35DODECYL-BETA-D-MALTOSIDE
lig 26
LMT
A
1018 35DODECYL-BETA-D-MALTOSIDE
lig 27
GOL
A
1019 6GLYCEROL
lig 28
CLA
B
601 65CHLOROPHYLL A
lig 29
CLA
B
602 65CHLOROPHYLL A
lig 30
CLA
B
603 65CHLOROPHYLL A
lig 31
CLA
B
604 65CHLOROPHYLL A
lig 32
CLA
B
605 65CHLOROPHYLL A
lig 33
CLA
B
606 65CHLOROPHYLL A
lig 34
CLA
B
607 65CHLOROPHYLL A
lig 35
CLA
B
608 65CHLOROPHYLL A
lig 36
CLA
B
609 65CHLOROPHYLL A
lig 37
CLA
B
610 65CHLOROPHYLL A
lig 38
CLA
B
611 65CHLOROPHYLL A
lig 39
CLA
B
612 65CHLOROPHYLL A
lig 40
CLA
B
613 65CHLOROPHYLL A
lig 41
CLA
B
614 65CHLOROPHYLL A
lig 42
CLA
B
615 65CHLOROPHYLL A
lig 43
CLA
B
616 65CHLOROPHYLL A
lig 44
BCR
B
617 40BETA-CAROTENE
lig 45
BCR
B
618 40BETA-CAROTENE
lig 46
BCR
B
619 40BETA-CAROTENE
lig 47
SQD
B
620 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 48
LHG
B
621 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 49
LMG
B
622 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 50
LMT
B
623 35DODECYL-BETA-D-MALTOSIDE
lig 51
HTG
B
624 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 52
UNL
B
625 16UNKNOWN LIGAND
lig 53
DMS
B
626 4DIMETHYL SULFOXIDE
lig 54
DMS
B
627 4DIMETHYL SULFOXIDE
lig 55
HTG
B
628 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 56
HTG
B
629 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 57
UNL
B
630 16UNKNOWN LIGAND
lig 58
GOL
B
631 6GLYCEROL
lig 59
DMS
B
632 4DIMETHYL SULFOXIDE
lig 60
DMS
B
633 4DIMETHYL SULFOXIDE
lig 61
DMS
B
634 4DIMETHYL SULFOXIDE
lig 62
CLA
C
501 65CHLOROPHYLL A
lig 63
CLA
C
502 65CHLOROPHYLL A
lig 64
CLA
C
503 65CHLOROPHYLL A
lig 65
CLA
C
504 65CHLOROPHYLL A
lig 66
CLA
C
505 65CHLOROPHYLL A
lig 67
CLA
C
506 65CHLOROPHYLL A
lig 68
CLA
C
507 65CHLOROPHYLL A
lig 69
CLA
C
508 65CHLOROPHYLL A
lig 70
CLA
C
509 65CHLOROPHYLL A
lig 71
CLA
C
510 65CHLOROPHYLL A
lig 72
CLA
C
511 65CHLOROPHYLL A
lig 73
CLA
C
512 65CHLOROPHYLL A
lig 74
CLA
C
513 65CHLOROPHYLL A
lig 75
BCR
C
514 40BETA-CAROTENE
lig 76
DGD
C
515 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 77
DGD
C
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 78
DGD
C
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 79
LMG
C
518 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 80
LMG
C
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 81
LMT
C
520 35DODECYL-BETA-D-MALTOSIDE
lig 82
HTG
C
521 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 83
HTG
C
522 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 84
DMS
C
523 4DIMETHYL SULFOXIDE
lig 85
DMS
C
524 4DIMETHYL SULFOXIDE
lig 86
DMS
C
525 4DIMETHYL SULFOXIDE
lig 87
DMS
C
526 4DIMETHYL SULFOXIDE
lig 88
DMS
C
527 4DIMETHYL SULFOXIDE
lig 89
BCT
D
401 4BICARBONATE ION
lig 90
CLA
D
402 65CHLOROPHYLL A
lig 91
CLA
D
403 65CHLOROPHYLL A
lig 92
PHO
D
404 64PHEOPHYTIN A
lig 93
CLA
D
405 65CHLOROPHYLL A
lig 94
BCR
D
406 40BETA-CAROTENE
lig 95
PL9
D
407 55 BENZOQUINONE
lig 96
SQD
D
408 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 97
LHG
D
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 98
LHG
D
410 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 99
LHG
D
411 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 100
LMG
D
412 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 101
HTG
D
413 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 102
UNL
D
414 40UNKNOWN LIGAND
lig 103
UNL
D
415 16UNKNOWN LIGAND
lig 104
DMS
D
416 4DIMETHYL SULFOXIDE
lig 105
DMS
D
417 4DIMETHYL SULFOXIDE
lig 106
GOL
D
418 6GLYCEROL
lig 107
HTG
D
419 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 108
LHG
E
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 109
HEM
F
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 110
BCR
H
101 40BETA-CAROTENE
lig 111
DGD
H
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 112
UNL
I
101 13UNKNOWN LIGAND
lig 113
UNL
I
102 13UNKNOWN LIGAND
lig 114
BCR
J
101 40BETA-CAROTENE
lig 115
UNL
J
102 16UNKNOWN LIGAND
lig 116
MG
J
103 1MAGNESIUM ION
lig 117
BCR
K
101 40BETA-CAROTENE
lig 118
BCR
K
102 40BETA-CAROTENE
lig 119
UNL
K
103 34UNKNOWN LIGAND
lig 120
MG
K
104 1MAGNESIUM ION
lig 121
UNL
L
101 16UNKNOWN LIGAND
lig 122
LMT
M
101 35DODECYL-BETA-D-MALTOSIDE
lig 123
LMT
M
102 35DODECYL-BETA-D-MALTOSIDE
lig 124
DMS
O
301 4DIMETHYL SULFOXIDE
lig 125
DMS
O
302 4DIMETHYL SULFOXIDE
lig 126
BCR
T
101 40BETA-CAROTENE
lig 127
DMS
U
201 4DIMETHYL SULFOXIDE
lig 128
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 129
HTG
V
202 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 130
DMS
V
203 4DIMETHYL SULFOXIDE
lig 131
GOL
V
204 6GLYCEROL
lig 132
DMS
V
205 4DIMETHYL SULFOXIDE
lig 133
GOL
V
206 6GLYCEROL
lig 134
GOL
V
207 6GLYCEROL
lig 135
UNL
Y
101 16UNKNOWN LIGAND
lig 136
UNL
X
101 16UNKNOWN LIGAND
lig 137
LMG
Z
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 138
SQD
a
401 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 139
LMT
a
402 35DODECYL-BETA-D-MALTOSIDE
lig 140
OER
a
403 10SR-MN4-O5 CLUSTER
lig 141
FE2
a
404 1FE (II) ION
lig 142
CL
a
405 1CHLORIDE ION
lig 143
CL
a
406 1CHLORIDE ION
lig 144
CLA
a
407 65CHLOROPHYLL A
lig 145
CLA
a
408 65CHLOROPHYLL A
lig 146
CLA
a
409 65CHLOROPHYLL A
lig 147
PHO
a
410 64PHEOPHYTIN A
lig 148
PHO
a
411 64PHEOPHYTIN A
lig 149
CLA
a
412 65CHLOROPHYLL A
lig 150
BCR
a
413 40BETA-CAROTENE
lig 151
PL9
a
414 55 BENZOQUINONE
lig 152
LMG
a
415 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 153
LMT
a
416 35DODECYL-BETA-D-MALTOSIDE
lig 154
DMS
a
417 4DIMETHYL SULFOXIDE
lig 155
DMS
a
418 4DIMETHYL SULFOXIDE
lig 156
UNL
a
419 30UNKNOWN LIGAND
lig 157
GOL
a
420 6GLYCEROL
lig 158
HTG
b
601 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 159
HTG
b
602 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 160
UNL
b
603 16UNKNOWN LIGAND
lig 161
CLA
b
604 65CHLOROPHYLL A
lig 162
CLA
b
605 65CHLOROPHYLL A
lig 163
CLA
b
606 65CHLOROPHYLL A
lig 164
CLA
b
607 65CHLOROPHYLL A
lig 165
CLA
b
608 65CHLOROPHYLL A
lig 166
CLA
b
609 65CHLOROPHYLL A
lig 167
CLA
b
610 65CHLOROPHYLL A
lig 168
CLA
b
611 65CHLOROPHYLL A
lig 169
CLA
b
612 65CHLOROPHYLL A
lig 170
CLA
b
613 65CHLOROPHYLL A
lig 171
CLA
b
614 65CHLOROPHYLL A
lig 172
CLA
b
615 65CHLOROPHYLL A
lig 173
CLA
b
616 65CHLOROPHYLL A
lig 174
CLA
b
617 65CHLOROPHYLL A
lig 175
CLA
b
618 65CHLOROPHYLL A
lig 176
CLA
b
619 65CHLOROPHYLL A
lig 177
BCR
b
620 40BETA-CAROTENE
lig 178
BCR
b
621 40BETA-CAROTENE
lig 179
BCR
b
622 40BETA-CAROTENE
lig 180
SQD
b
623 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 181
LHG
b
624 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 182
LMT
b
625 35DODECYL-BETA-D-MALTOSIDE
lig 183
HTG
b
626 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 184
UNL
b
627 16UNKNOWN LIGAND
lig 185
DMS
b
628 4DIMETHYL SULFOXIDE
lig 186
DMS
b
629 4DIMETHYL SULFOXIDE
lig 187
HTG
b
630 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 188
LMT
b
631 35DODECYL-BETA-D-MALTOSIDE
lig 189
GOL
b
632 6GLYCEROL
lig 190
DMS
b
633 4DIMETHYL SULFOXIDE
lig 191
DMS
b
634 4DIMETHYL SULFOXIDE
lig 192
DMS
b
635 4DIMETHYL SULFOXIDE
lig 193
CLA
c
501 65CHLOROPHYLL A
lig 194
CLA
c
502 65CHLOROPHYLL A
lig 195
CLA
c
503 65CHLOROPHYLL A
lig 196
CLA
c
504 65CHLOROPHYLL A
lig 197
CLA
c
505 65CHLOROPHYLL A
lig 198
CLA
c
506 65CHLOROPHYLL A
lig 199
CLA
c
507 65CHLOROPHYLL A
lig 200
CLA
c
508 65CHLOROPHYLL A
lig 201
CLA
c
509 65CHLOROPHYLL A
lig 202
CLA
c
510 65CHLOROPHYLL A
lig 203
CLA
c
511 65CHLOROPHYLL A
lig 204
CLA
c
512 65CHLOROPHYLL A
lig 205
CLA
c
513 65CHLOROPHYLL A
lig 206
BCR
c
514 40BETA-CAROTENE
lig 207
DGD
c
515 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 208
DGD
c
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 209
DGD
c
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 210
SQD
c
518 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 211
LMG
c
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 212
LMG
c
520 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 213
LMG
c
521 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 214
HTG
c
522 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 215
UNL
c
523 32UNKNOWN LIGAND
lig 216
DMS
c
524 4DIMETHYL SULFOXIDE
lig 217
HTG
c
525 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 218
DMS
c
526 4DIMETHYL SULFOXIDE
lig 219
DMS
c
527 4DIMETHYL SULFOXIDE
lig 220
DMS
c
528 4DIMETHYL SULFOXIDE
lig 221
DMS
c
529 4DIMETHYL SULFOXIDE
lig 222
BCT
d
401 4BICARBONATE ION
lig 223
CLA
d
402 65CHLOROPHYLL A
lig 224
CLA
d
403 65CHLOROPHYLL A
lig 225
BCR
d
404 40BETA-CAROTENE
lig 226
PL9
d
405 55 BENZOQUINONE
lig 227
LHG
d
406 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 228
LHG
d
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 229
LHG
d
408 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 230
LMG
d
409 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 231
HTG
d
410 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 232
UNL
d
411 36UNKNOWN LIGAND
lig 233
UNL
d
412 16UNKNOWN LIGAND
lig 234
DMS
d
413 4DIMETHYL SULFOXIDE
lig 235
DMS
d
414 4DIMETHYL SULFOXIDE
lig 236
GOL
d
415 6GLYCEROL
lig 237
HTG
d
416 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 238
GOL
d
417 6GLYCEROL
lig 239
LHG
e
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 240
HEM
f
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 241
SQD
f
102 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 242
LMT
f
103 35DODECYL-BETA-D-MALTOSIDE
lig 243
BCR
h
101 40BETA-CAROTENE
lig 244
DGD
h
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 245
UNL
i
101 16UNKNOWN LIGAND
lig 246
LMT
i
102 35DODECYL-BETA-D-MALTOSIDE
lig 247
UNL
j
101 16UNKNOWN LIGAND
lig 248
MG
j
102 1MAGNESIUM ION
lig 249
BCR
k
101 40BETA-CAROTENE
lig 250
BCR
k
102 40BETA-CAROTENE
lig 251
MG
k
103 1MAGNESIUM ION
lig 252
UNL
l
101 16UNKNOWN LIGAND
lig 253
LMT
m
101 35DODECYL-BETA-D-MALTOSIDE
lig 254
LMG
m
102 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 255
LMT
m
103 35DODECYL-BETA-D-MALTOSIDE
lig 256
HTG
o
301 19HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 257
BCR
t
101 40BETA-CAROTENE
lig 258
UNL
t
102 16UNKNOWN LIGAND
lig 259
LMT
t
103 35DODECYL-BETA-D-MALTOSIDE
lig 260
DMS
u
201 4DIMETHYL SULFOXIDE
lig 261
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 262
DMS
v
202 4DIMETHYL SULFOXIDE
lig 263
GOL
v
203 6GLYCEROL
lig 264
GOL
v
204 6GLYCEROL
lig 265
BCR
y
101 40BETA-CAROTENE
lig 266
UNL
y
102 16UNKNOWN LIGAND
lig 267
UNL
x
101 16UNKNOWN LIGAND