Analysis of Ligand-Protein Contacts in PDB entry:
4OMD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 4OMD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HY1
H
1 9PHENYLACETALDEHYDE
lig 2
00S
H
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 3
HY1
I
1 9PHENYLACETALDEHYDE
lig 4
00S
I
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 5
HY1
J
1 9PHENYLACETALDEHYDE
lig 6
00S
J
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 7
HY1
K
1 9PHENYLACETALDEHYDE
lig 8
00S
K
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 9
HY1
L
1 9PHENYLACETALDEHYDE
lig 10
00S
L
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 11
HY1
N
1 9PHENYLACETALDEHYDE
lig 12
00S
N
5 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 13
FMT
A
601 3FORMIC ACID
lig 14
FMT
A
602 3FORMIC ACID
lig 15
CA
A
603 1CALCIUM ION
lig 16
CA
A
604 1CALCIUM ION
lig 17
CA
A
605 1CALCIUM ION
lig 18
NA
A
606 1SODIUM ION
lig 19
FMT
B
601 3FORMIC ACID
lig 20
FMT
B
602 3FORMIC ACID
lig 21
CA
B
603 1CALCIUM ION
lig 22
CA
B
604 1CALCIUM ION
lig 23
CA
B
605 1CALCIUM ION
lig 24
NA
B
606 1SODIUM ION
lig 25
FMT
C
601 3FORMIC ACID
lig 26
FMT
C
602 3FORMIC ACID
lig 27
CA
C
603 1CALCIUM ION
lig 28
CA
C
604 1CALCIUM ION
lig 29
CA
C
605 1CALCIUM ION
lig 30
NA
C
606 1SODIUM ION
lig 31
FMT
D
601 3FORMIC ACID
lig 32
FMT
D
602 3FORMIC ACID
lig 33
CA
D
603 1CALCIUM ION
lig 34
CA
D
604 1CALCIUM ION
lig 35
CA
D
605 1CALCIUM ION
lig 36
NA
D
606 1SODIUM ION
lig 37
FMT
E
601 3FORMIC ACID
lig 38
FMT
E
602 3FORMIC ACID
lig 39
CA
E
603 1CALCIUM ION
lig 40
CA
E
604 1CALCIUM ION
lig 41
CA
E
605 1CALCIUM ION
lig 42
NA
E
606 1SODIUM ION
lig 43
FMT
F
601 3FORMIC ACID
lig 44
FMT
F
602 3FORMIC ACID
lig 45
CA
F
603 1CALCIUM ION
lig 46
CA
F
604 1CALCIUM ION
lig 47
CA
F
605 1CALCIUM ION
lig 48
NA
F
606 1SODIUM ION