Analysis of Ligand-Protein Contacts in PDB entry:
4ARA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 4ARA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
C56
A
600 25 YL]METHYL}-2-METHOXY-5-NITROBENZAMIDE
lig 2
PEG
A
1544 7DI(HYDROXYETHYL)ETHER
lig 3
EDO
A
1545 41,2-ETHANEDIOL
lig 4
PEG
A
1546 7DI(HYDROXYETHYL)ETHER
lig 5
PEG
A
1547 7DI(HYDROXYETHYL)ETHER
lig 6
EDO
A
1548 41,2-ETHANEDIOL
lig 7
NAG
A
1549 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
EDO
A
1550 41,2-ETHANEDIOL
lig 9
EDO
A
1551 41,2-ETHANEDIOL
lig 10
EDO
A
1552 41,2-ETHANEDIOL
lig 11
NAG
A
1553 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
C56
B
600 25 YL]METHYL}-2-METHOXY-5-NITROBENZAMIDE
lig 13
PEG
B
1545 7DI(HYDROXYETHYL)ETHER
lig 14
1PE
B
1546 16PENTAETHYLENE GLYCOL
lig 15
PEG
B
1547 7DI(HYDROXYETHYL)ETHER
lig 16
PEG
B
1548 7DI(HYDROXYETHYL)ETHER
lig 17
EDO
B
1549 41,2-ETHANEDIOL
lig 18
PEG
B
1550 7DI(HYDROXYETHYL)ETHER
lig 19
PEG
B
1551 7DI(HYDROXYETHYL)ETHER
lig 20
NAG
B
1552 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
EDO
B
1553 41,2-ETHANEDIOL
lig 22
PEG
B
1554 7DI(HYDROXYETHYL)ETHER
lig 23
CL
B
1555 1CHLORIDE ION
lig 24
EDO
B
1556 41,2-ETHANEDIOL