Analysis of Ligand-Protein Contacts in PDB entry:
4DN5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 4DN5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
1001 1MAGNESIUM ION
lig 2
GOL
A
1002 6GLYCEROL
lig 3
EDO
A
1003 41,2-ETHANEDIOL
lig 4
EDO
A
1004 41,2-ETHANEDIOL
lig 5
EDO
A
1005 41,2-ETHANEDIOL
lig 6
EDO
A
1006 41,2-ETHANEDIOL
lig 7
EDO
A
1007 41,2-ETHANEDIOL
lig 8
AGS
A
1008 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 9
MG
B
1001 1MAGNESIUM ION
lig 10
EDO
B
1002 41,2-ETHANEDIOL
lig 11
AGS
B
1003 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER