Analysis of Ligand-Protein Contacts in PDB entry:
4GWM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 59 ligands in PDB entry 4GWM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 9
FUC
D
6 10ALPHA-L-FUCOPYRANOSE
lig 10
FUC
D
7 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 25
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 31
FUC
I
5 10ALPHA-L-FUCOPYRANOSE
lig 32
FUC
I
6 10ALPHA-L-FUCOPYRANOSE
lig 33
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
FUC
J
2 10ALPHA-L-FUCOPYRANOSE
lig 35
NAG
J
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
FUC
J
4 10ALPHA-L-FUCOPYRANOSE
lig 37
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
K
7 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
K
8 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
K
9 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
FUC
L
2 10ALPHA-L-FUCOPYRANOSE
lig 48
ZN
A
701 1ZINC ION
lig 49
NA
A
702 1SODIUM ION
lig 50
NAG
A
727 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
CL
A
728 1CHLORIDE ION
lig 52
CL
A
729 1CHLORIDE ION
lig 53
GOL
A
730 6GLYCEROL
lig 54
ZN
B
701 1ZINC ION
lig 55
NA
B
702 1SODIUM ION
lig 56
NAG
B
724 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
CL
B
727 1CHLORIDE ION
lig 58
CL
B
728 1CHLORIDE ION
lig 59
CL
B
729 1CHLORIDE ION