Analysis of Ligand-Protein Contacts in PDB entry:
4NDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 4NDI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
AMP
A
401 23ADENOSINE MONOPHOSPHATE
lig 2
ZN
A
402 1ZINC ION
lig 3
NA
A
403 1SODIUM ION
lig 4
BME
A
404 4BETA-MERCAPTOETHANOL
lig 5
GOL
A
405 6GLYCEROL
lig 6
AMP
B
401 23ADENOSINE MONOPHOSPHATE
lig 7
ZN
B
402 1ZINC ION
lig 8
BME
B
403 4BETA-MERCAPTOETHANOL
lig 9
K
D
101 1POTASSIUM ION
lig 10
K
G
101 1POTASSIUM ION