Analysis of Ligand-Protein Contacts in PDB entry:
5YWB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5YWB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ADP
A
401 27ADENOSINE-5'-DIPHOSPHATE
lig 2
ADP
B
2501 27ADENOSINE-5'-DIPHOSPHATE
lig 3
ADP
B
2502 27ADENOSINE-5'-DIPHOSPHATE
lig 4
MG
B
2503 1MAGNESIUM ION
lig 5
MG
B
2504 1MAGNESIUM ION
lig 6
ADP
C
401 27ADENOSINE-5'-DIPHOSPHATE
lig 7
ADP
D
2501 27ADENOSINE-5'-DIPHOSPHATE
lig 8
ADP
D
2502 27ADENOSINE-5'-DIPHOSPHATE
lig 9
MG
D
2503 1MAGNESIUM ION
lig 10
MG
D
2504 1MAGNESIUM ION
lig 11
ADP
E
401 27ADENOSINE-5'-DIPHOSPHATE
lig 12
ADP
F
2501 27ADENOSINE-5'-DIPHOSPHATE
lig 13
ADP
F
2502 27ADENOSINE-5'-DIPHOSPHATE
lig 14
MG
F
2503 1MAGNESIUM ION
lig 15
MG
F
2504 1MAGNESIUM ION
lig 16
ADP
G
401 27ADENOSINE-5'-DIPHOSPHATE
lig 17
ADP
H
2501 27ADENOSINE-5'-DIPHOSPHATE
lig 18
ADP
H
2502 27ADENOSINE-5'-DIPHOSPHATE
lig 19
MG
H
2503 1MAGNESIUM ION
lig 20
MG
H
2504 1MAGNESIUM ION