Analysis of Ligand-Protein Contacts in PDB entry:
5CB4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5CB4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
GOL
A
504 6GLYCEROL
lig 5
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
B
502 1MAGNESIUM ION
lig 7
MES
B
503 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 8
TIV
B
504 28 YL)-4-(1H-INDOL-3-YL)PYRROLIDINE-2,5-DION
lig 9
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
MG
C
502 1MAGNESIUM ION
lig 11
CA
C
503 1CALCIUM ION
lig 12
GDP
D
501 28GUANOSINE-5'-DIPHOSPHATE
lig 13
TIV
D
502 28 YL)-4-(1H-INDOL-3-YL)PYRROLIDINE-2,5-DION
lig 14
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST