Analysis of Ligand-Protein Contacts in PDB entry:
5HF5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5HF5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 7
DEP
A
604 8DIETHYL PHOSPHONATE
lig 8
EDO
A
605 41,2-ETHANEDIOL
lig 9
EDO
A
606 41,2-ETHANEDIOL
lig 10
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
PE8
B
605 253,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-D
lig 12
DEP
B
606 8DIETHYL PHOSPHONATE
lig 13
EDO
B
607 41,2-ETHANEDIOL
lig 14
EDO
B
608 41,2-ETHANEDIOL
lig 15
NO3
B
609 4NITRATE ION