Analysis of Ligand-Protein Contacts in PDB entry:
5HFA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5HFA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 7
DEP
A
604 8DIETHYL PHOSPHONATE
lig 8
EDO
A
605 41,2-ETHANEDIOL
lig 9
EDO
A
606 41,2-ETHANEDIOL
lig 10
FP1
A
607 10N-HYDROXY-1-(1-METHYLPYRIDIN-2(1H)-YLIDENE
lig 11
FP1
A
608 10N-HYDROXY-1-(1-METHYLPYRIDIN-2(1H)-YLIDENE
lig 12
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
DEP
B
605 8DIETHYL PHOSPHONATE
lig 14
EDO
B
606 41,2-ETHANEDIOL
lig 15
EDO
B
607 41,2-ETHANEDIOL
lig 16
NO3
B
608 4NITRATE ION
lig 17
FP1
B
609 10N-HYDROXY-1-(1-METHYLPYRIDIN-2(1H)-YLIDENE