Analysis of Ligand-Protein Contacts in PDB entry:
5HP1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5HP1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
OMC
F
2 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 2
OMC
F
4 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 3
OMC
E
2 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 4
OMC
E
4 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 5
MG
A
601 1MAGNESIUM ION
lig 6
PPF
A
602 7PHOSPHONOFORMIC ACID
lig 7
MG
A
603 1MAGNESIUM ION
lig 8
MG
A
604 1MAGNESIUM ION
lig 9
MG
A
605 1MAGNESIUM ION
lig 10
SO4
A
606 5SULFATE ION
lig 11
SUC
B
2001 23SUCROSE
lig 12
GOL
B
2002 6GLYCEROL
lig 13
GOL
B
2003 6GLYCEROL
lig 14
PPF
C
601 7PHOSPHONOFORMIC ACID
lig 15
MG
C
602 1MAGNESIUM ION
lig 16
MG
C
603 1MAGNESIUM ION
lig 17
MG
C
604 1MAGNESIUM ION
lig 18
SO4
C
605 5SULFATE ION
lig 19
MG
C
606 1MAGNESIUM ION
lig 20
ATM
F
101 223'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHAT
lig 21
SUC
D
501 23SUCROSE
lig 22
ATM
E
101 223'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHAT