Analysis of Ligand-Protein Contacts in PDB entry:
5L13


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 5L13. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
601 1SODIUM ION
lig 2
EDO
A
602 41,2-ETHANEDIOL
lig 3
EDO
A
603 41,2-ETHANEDIOL
lig 4
GAI
A
604 4GUANIDINE
lig 5
GAI
A
605 4GUANIDINE
lig 6
6ZE
A
606 20 ONE
lig 7
NA
B
601 1SODIUM ION
lig 8
EDO
B
602 41,2-ETHANEDIOL
lig 9
EDO
B
603 41,2-ETHANEDIOL
lig 10
GAI
B
604 4GUANIDINE
lig 11
6ZE
B
605 20 ONE
lig 12
NA
C
601 1SODIUM ION
lig 13
GAI
C
602 4GUANIDINE
lig 14
6ZE
C
603 20 ONE
lig 15
NA
D
601 1SODIUM ION
lig 16
EDO
D
602 41,2-ETHANEDIOL
lig 17
GAI
D
603 4GUANIDINE
lig 18
GAI
D
604 4GUANIDINE
lig 19
GAI
D
605 4GUANIDINE
lig 20
GAI
D
606 4GUANIDINE
lig 21
6ZE
D
607 20 ONE
lig 22
NA
E
601 1SODIUM ION
lig 23
EDO
E
602 41,2-ETHANEDIOL
lig 24
EDO
E
603 41,2-ETHANEDIOL
lig 25
GAI
E
604 4GUANIDINE
lig 26
GAI
E
605 4GUANIDINE
lig 27
GAI
E
606 4GUANIDINE
lig 28
6ZE
E
607 20 ONE
lig 29
NA
F
601 1SODIUM ION
lig 30
EDO
F
602 41,2-ETHANEDIOL
lig 31
EDO
F
603 41,2-ETHANEDIOL
lig 32
GAI
F
604 4GUANIDINE
lig 33
6ZE
F
605 20 ONE
lig 34
NA
G
601 1SODIUM ION
lig 35
EDO
G
602 41,2-ETHANEDIOL
lig 36
EDO
G
603 41,2-ETHANEDIOL
lig 37
EDO
G
604 41,2-ETHANEDIOL
lig 38
GAI
G
605 4GUANIDINE
lig 39
GAI
G
606 4GUANIDINE
lig 40
GAI
G
607 4GUANIDINE
lig 41
6ZE
G
608 20 ONE
lig 42
NA
H
601 1SODIUM ION
lig 43
GAI
H
602 4GUANIDINE
lig 44
6ZE
H
603 20 ONE