Analysis of Ligand-Protein Contacts in PDB entry:
5MGT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5MGT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
SO4
A
503 5SULFATE ION
lig 4
SO4
A
504 5SULFATE ION
lig 5
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
B
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
SO4
B
503 5SULFATE ION
lig 8
SO4
B
504 5SULFATE ION
lig 9
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
SO4
C
503 5SULFATE ION
lig 12
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
D
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
SO4
D
503 5SULFATE ION
lig 15
CL
D
504 1CHLORIDE ION
lig 16
NAG
E
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
F
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
F
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
F
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
SO4
F
504 5SULFATE ION