Analysis of Ligand-Protein Contacts in PDB entry:
5NN4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 5NN4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 16
SC2
A
1016 10N-ACETYL-L-CYSTEINE
lig 17
SC2
A
1017 10N-ACETYL-L-CYSTEINE
lig 18
SO4
A
1018 5SULFATE ION
lig 19
SO4
A
1019 5SULFATE ION
lig 20
SO4
A
1020 5SULFATE ION
lig 21
SO4
A
1021 5SULFATE ION
lig 22
CL
A
1022 1CHLORIDE ION
lig 23
CL
A
1023 1CHLORIDE ION
lig 24
PGE
A
1024 10TRIETHYLENE GLYCOL
lig 25
GOL
A
1025 6GLYCEROL
lig 26
GOL
A
1026 6GLYCEROL
lig 27
EDO
A
1027 41,2-ETHANEDIOL
lig 28
EDO
A
1028 41,2-ETHANEDIOL
lig 29
EDO
A
1029 41,2-ETHANEDIOL
lig 30
EDO
A
1030 41,2-ETHANEDIOL
lig 31
EDO
A
1031 41,2-ETHANEDIOL
lig 32
EDO
A
1032 41,2-ETHANEDIOL
lig 33
EDO
A
1033 41,2-ETHANEDIOL
lig 34
EDO
A
1034 41,2-ETHANEDIOL
lig 35
EDO
A
1035 41,2-ETHANEDIOL
lig 36
EDO
A
1036 41,2-ETHANEDIOL
lig 37
EDO
A
1037 41,2-ETHANEDIOL
lig 38
EDO
A
1038 41,2-ETHANEDIOL
lig 39
EDO
A
1039 41,2-ETHANEDIOL
lig 40
EDO
A
1040 41,2-ETHANEDIOL
lig 41
EDO
A
1041 41,2-ETHANEDIOL
lig 42
EDO
A
1042 41,2-ETHANEDIOL
lig 43
EDO
A
1043 41,2-ETHANEDIOL
lig 44
EDO
A
1044 41,2-ETHANEDIOL