Analysis of Ligand-Protein Contacts in PDB entry:
5TYV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5TYV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TTP
A
501 29THYMIDINE-5'-TRIPHOSPHATE
lig 2
MN
A
502 1MANGANESE (II) ION
lig 3
MN
A
503 1MANGANESE (II) ION
lig 4
MN
A
504 1MANGANESE (II) ION
lig 5
MN
A
505 1MANGANESE (II) ION
lig 6
MN
A
506 1MANGANESE (II) ION
lig 7
NA
A
507 1SODIUM ION
lig 8
EDO
A
508 41,2-ETHANEDIOL
lig 9
EDO
A
509 41,2-ETHANEDIOL
lig 10
EPE
A
510 54-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 11
MN
T
101 1MANGANESE (II) ION
lig 12
EDO
P
102 41,2-ETHANEDIOL