Analysis of Ligand-Protein Contacts in PDB entry:
5YKG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5YKG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
AGS
A
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 2
GBM
B
2001 33 SULFAMOYL]PHENYL}ETHYL)-2-METHOXYBENZAMID
lig 3
AGS
B
2002 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 4
AGS
C
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 5
GBM
D
2001 33 SULFAMOYL]PHENYL}ETHYL)-2-METHOXYBENZAMID
lig 6
AGS
D
2002 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 7
AGS
E
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 8
GBM
F
2001 33 SULFAMOYL]PHENYL}ETHYL)-2-METHOXYBENZAMID
lig 9
AGS
F
2002 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 10
AGS
G
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 11
GBM
H
2001 33 SULFAMOYL]PHENYL}ETHYL)-2-METHOXYBENZAMID
lig 12
AGS
H
2002 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER