Analysis of Ligand-Protein Contacts in PDB entry:
6CQW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6CQW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
VX
A
606 6O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP
lig 10
HI6
A
607 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR
lig 11
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
VX
B
605 6O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP
lig 13
HI6
B
606 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR