Analysis of Ligand-Protein Contacts in PDB entry:
6CQV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6CQV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 9
HI6
A
601 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR
lig 10
VX
A
607 6O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP
lig 11
HI6
B
601 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR
lig 12
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
VX
B
606 6O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP