Analysis of Ligand-Protein Contacts in PDB entry:
6CQY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6CQY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
HI6
A
605 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR
lig 9
VX
A
606 7O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP
lig 10
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
HI6
B
605 21 METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYR
lig 12
VX
B
606 7O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP