Analysis of Ligand-Protein Contacts in PDB entry:
6F25


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 6F25. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
SO4
A
607 5SULFATE ION
lig 11
SO4
A
608 5SULFATE ION
lig 12
SO4
A
609 5SULFATE ION
lig 13
SO4
A
610 5SULFATE ION
lig 14
SO4
A
611 5SULFATE ION
lig 15
SO4
A
612 5SULFATE ION
lig 16
CVZ
A
613 45 METHYL]AMINO]PENTYL]-6-METHYL-PYRIMIDINE-
lig 17
CL
A
614 1CHLORIDE ION
lig 18
CL
A
615 1CHLORIDE ION
lig 19
CL
A
616 1CHLORIDE ION
lig 20
CL
A
617 1CHLORIDE ION
lig 21
CL
A
618 1CHLORIDE ION
lig 22
CL
A
619 1CHLORIDE ION
lig 23
CL
A
620 1CHLORIDE ION
lig 24
CL
A
621 1CHLORIDE ION
lig 25
CL
A
622 1CHLORIDE ION
lig 26
CL
A
623 1CHLORIDE ION
lig 27
CL
A
624 1CHLORIDE ION
lig 28
CL
A
625 1CHLORIDE ION
lig 29
CL
A
626 1CHLORIDE ION
lig 30
CL
A
627 1CHLORIDE ION
lig 31
CL
A
628 1CHLORIDE ION
lig 32
CL
A
629 1CHLORIDE ION
lig 33
SO4
B
604 5SULFATE ION
lig 34
SO4
B
605 5SULFATE ION
lig 35
SO4
B
606 5SULFATE ION
lig 36
SO4
B
607 5SULFATE ION
lig 37
SO4
B
608 5SULFATE ION
lig 38
SO4
B
609 5SULFATE ION
lig 39
CVZ
B
610 45 METHYL]AMINO]PENTYL]-6-METHYL-PYRIMIDINE-
lig 40
CL
B
611 1CHLORIDE ION
lig 41
CL
B
612 1CHLORIDE ION
lig 42
CL
B
613 1CHLORIDE ION
lig 43
CL
B
614 1CHLORIDE ION
lig 44
CL
B
615 1CHLORIDE ION
lig 45
CL
B
616 1CHLORIDE ION
lig 46
CL
B
617 1CHLORIDE ION
lig 47
CL
B
618 1CHLORIDE ION
lig 48
CL
B
619 1CHLORIDE ION
lig 49
CL
B
620 1CHLORIDE ION
lig 50
CL
B
621 1CHLORIDE ION
lig 51
CL
B
622 1CHLORIDE ION
lig 52
CL
B
623 1CHLORIDE ION