Analysis of Ligand-Protein Contacts in PDB entry:
6KQD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6KQD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
B
2001 1MAGNESIUM ION
lig 2
ZN
D
2001 1ZINC ION
lig 3
ZN
D
2002 1ZINC ION
lig 4
MG
D
2003 1MAGNESIUM ION
lig 5
MG
D
2004 1MAGNESIUM ION
lig 6
MG
F
2001 1MAGNESIUM ION
lig 7
G
G
101 222'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 8
MG
K
1001 1MAGNESIUM ION
lig 9
ZN
N
2001 1ZINC ION
lig 10
ZN
N
2002 1ZINC ION
lig 11
MG
N
2003 1MAGNESIUM ION
lig 12
MG
N
2004 1MAGNESIUM ION
lig 13
G
Q
101 222'-DEOXYGUANOSINE-5'-MONOPHOSPHATE