Analysis of Ligand-Protein Contacts in PDB entry:
6QDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 6QDT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
B
594 11PHOSPHOTHREONINE
lig 2
CA
A
301 1CALCIUM ION
lig 3
CL
A
302 1CHLORIDE ION
lig 4
NA
A
303 1SODIUM ION
lig 5
NA
A
304 1SODIUM ION
lig 6
NA
A
305 1SODIUM ION
lig 7
NA
A
306 1SODIUM ION
lig 8
NA
A
307 1SODIUM ION