Analysis of Ligand-Protein Contacts in PDB entry:
6RIR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 6RIR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
72 11PHOSPHOTHREONINE
lig 2
TPO
B
72 11PHOSPHOTHREONINE
lig 3
GTP
A
201 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
MG
A
202 1MAGNESIUM ION
lig 5
GOL
A
203 6GLYCEROL
lig 6
GTP
B
900 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
MG
B
901 1MAGNESIUM ION