7X5Q Transport Protein date Mar 05, 2022
title Apo Truncated Vhchip (Delta 1-19) In Complex With Peptide (D
authors S.Sanram, A.Aunkham, W.Suginta, R.C.Robinson
compound source
Molecule: Chitoporin
Chain: A, B, C, D, E, F
Engineered: Yes
 Organism_scientific: Vibrio Harveyi
Organism_taxid: 669
Gene: Chip
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 Omp8 Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23a

Molecule: Asp-Gly-Ala-Asn-Ser-Asp
Chain: H
Engineered: Yes
Synthetic: Yes
Organism_scientific: Vibrio Harveyi
Organism_taxid: 669
symmetry Space Group: P 21 21 21
R_factor 0.211 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.085 182.602 196.808 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand C8E, NA enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (318 Kb) [Save to disk]
  • Biological Unit Coordinates (7x5q.pdb1.gz) 309 Kb
  • LPC: Ligand-Protein Contacts for 7X5Q
  • CSU: Contacts of Structural Units for 7X5Q
  • Structure Factors (2478 Kb)
  • Retrieve 7X5Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7X5Q from S2C, [Save to disk]
    • View 7X5Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7X5Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7x5q_E] [7x5q_A] [7x5q_F] [7x5q_B] [7x5q_C] [7x5q_H] [7x5q_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7X5Q
  • Community annotation for 7X5Q at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science