6KC4	Transferase Signaling Protein	date	Jun 27, 2019
title	Crystal Structure Of Human Fer Sh2 Domain Bound To A Phospho (Depyenvd)
authors	Y.Matsuura
compound		source
Molecule: Tyrosine-Protein Kinase Fer Chain: A, C, E, G, I, K Synonym: Feline Encephalitis Virus-Related Kinase Fer,Fujin Poultry Sarcomafeline Sarcoma-Related Protein Fer,Proto-On Fer,Tyrosine Kinase 3,P94-Fer; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fer, Tyk3 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Phosphopeptide (Edpyenvd) Chain: B, D, F, H, J, L Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1 21 1	R_factor 0.165 R_Free 0.186
crystal cell	length a length b length c angle alpha angle beta angle gamma 34.700 186.661 50.580 90.00 96.96 90.00
method	X-Ray Diffraction	resolution	1.37 Å
ligand	PTR	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, C, K, I, G, E

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (239 Kb) [Save to disk] Biological Unit Coordinates (6kc4.pdb1.gz) 39 Kb Biological Unit Coordinates (6kc4.pdb2.gz) 40 Kb Biological Unit Coordinates (6kc4.pdb3.gz) 39 Kb Biological Unit Coordinates (6kc4.pdb4.gz) 40 Kb Biological Unit Coordinates (6kc4.pdb5.gz) 40 Kb Biological Unit Coordinates (6kc4.pdb6.gz) 40 Kb LPC: Ligand-Protein Contacts for 6KC4 CSU: Contacts of Structural Units for 6KC4 Structure Factors (5785 Kb) Retrieve 6KC4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6KC4 from S2C, [Save to disk]

View 6KC4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6KC4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6kc4_D] [6kc4_K] [6kc4_J] [6kc4_A] [6kc4_H] [6kc4_I] [6kc4_E] [6kc4_F] [6kc4_B] [6kc4_C] [6kc4_G] [6kc4_L] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6KC4

Community annotation for 6KC4 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---