1J71 Structure of the extracellular aspartic proteinase from Candida tropicalis yeast. date
authors Symersky, J., Monod, M., Foundling, S.I.
compound source
symmetry
R_factor
R_Free 0.193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand EOH enzyme
related structures by homologous chain: 1EAG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution structure of the extracellular aspartic proteinase from Candida tropicalis yeast., Symersky J, Monod M, Foundling SI, Biochemistry 1997 Oct 21;36(42):12700-10. PMID:9335526
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1j71.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1J71
  • CSU: Contacts of Structural Units for 1J71
  • Likely Quarternary Molecular Structure file(s) for 1J71
  • Structure Factors (190 Kb)
  • Retrieve 1J71 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1J71 from S2C, [Save to disk]
  • Re-refined 1j71 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1J71 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1J71
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1J71, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j71a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1j71_A] [1j71_B] [1j71]
  • SWISS-PROT database: [Q00663]
  • Domain organization of [CARP_CANTR] by SWISSPFAM
  • Other resources with information on 1J71
  • Community annotation for 1J71 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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