5AN5 Cell Cycle date Sep 04, 2015
title B. Subtilis Gpsb C-Terminal Domain
authors J.Rismondo, R.M.Cleverley, H.V.Lane, S.Grohennig, A.Steglich, L.M G.Krishna Mannala, T.Hain, R.J.Lewis, S.Halbedel
compound source
Molecule: Cell Cycle Protein Gpsb
Chain: B, C, D, E, F, G, H, I, J
Fragment: C-Terminal Domain, Unp Residues 76-98
Synonym: Guiding Pbp1-Shuttling Protein, Gpsb
Engineered: Yes
 Organism_scientific: Bacillus Subtilis Subsp. Subtilis Str.
Organism_taxid: 224308
Atcc: 23857
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet28a
symmetry Space Group: P 1
R_factor 0.145 R_Free 0.163
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.594 36.203 43.179 85.59 89.32 65.53
method X-Ray Diffractionresolution 1.20 Å
ligand GOL enzyme
Primary referenceStructure of the bacterial cell division determinant GpsB and its interaction with penicillin binding proteins., Rismondo J, Cleverley RM, Lane HV, Grosshennig S, Steglich A, Moller L, Mannala GK, Hain T, Lewis RJ, Halbedel S, Mol Microbiol. 2015 Nov 17. doi: 10.1111/mmi.13279. PMID:26575090
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (5an5.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (5an5.pdb2.gz) 26 Kb
  • Biological Unit Coordinates (5an5.pdb3.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 5AN5
  • CSU: Contacts of Structural Units for 5AN5
  • Structure Factors (946 Kb)
  • Retrieve 5AN5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AN5 from S2C, [Save to disk]
  • Re-refined 5an5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AN5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AN5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5an5_E] [5an5_F] [5an5_I] [5an5_D] [5an5_G] [5an5_C] [5an5] [5an5_H] [5an5_B] [5an5_J]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5AN5
  • Community annotation for 5AN5 at PDBWiki (http://pdbwiki.org)

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