1AMM Crystallin date Mar 20, 1996
title 1.2 Angstrom Structure Of Gamma-B Crystallin At 150k
authors V.S.Kumaraswamy, P.F.Lindley, C.Slingsby, I.D.Glover
compound source
Molecule: Gamma B-Crystallin
Chain: A
Synonym: Gamma II-Crystallin
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Eye
Tissue: Eye Lens
symmetry Space Group: P 41 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.430 56.430 97.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
related structures by homologous chain: 1H4A, 1HK0
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAn eye lens protein-water structure: 1.2 A resolution structure of gammaB-crystallin at 150 K., Kumaraswamy VS, Lindley PF, Slingsby C, Glover ID, Acta Crystallogr D Biol Crystallogr. 1996 Jul 1;52(Pt 4):611-22. PMID:15299624
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1amm.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 1AMM
  • Likely Quarternary Molecular Structure file(s) for 1AMM
  • Retrieve 1AMM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AMM from S2C, [Save to disk]
  • View 1AMM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AMM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1AMM from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AMM, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1amm_1, region 1-85 [Jmol] [rasmolscript] [script source]
        - Domain d1amm_2, region 86-174 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1amm] [1amm_A]
  • SWISS-PROT database: [P02526]
  • Domain organization of [CRGB_BOVIN] by SWISSPFAM
  • Domain found in 1AMM: [XTALbg ] by SMART
  • Other resources with information on 1AMM
  • Community annotation for 1AMM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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