1MZH	Structural Genomics, Aldolase	date	Oct 07, 2002
title	Qr15, An Aldolase
authors	A.Y.Tan, P.C.Smith, J.Shen, R.Xiao, T.Acton, B.Rost, G.Montelione, J.F.Hunt, Northeast Structural Genomics Consortium (Nesg)
compound		source
Molecule: Deoxyribose-Phosphate Aldolase Chain: A, B Synonym: Phosphodeoxyriboaldolase, Deoxyriboaldolase Ec: 4.1.2.4 Engineered: Yes		Organism_scientific: Aquifex Aeolicus Organism_taxid: 63363 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.223 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 49.139 123.458 151.822 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	PO4	enzyme	Lyase E.C.4.1.2.4 BRENDA
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (1mzh.pdb1.gz) 78 Kb LPC: Ligand-Protein Contacts for 1MZH CSU: Contacts of Structural Units for 1MZH Likely Quarternary Molecular Structure file(s) for 1MZH Structure Factors (517 Kb) Retrieve 1MZH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MZH from S2C, [Save to disk] Re-refined 1mzh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1MZH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MZH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MZH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mzha_, region A [Jmol] [rasmolscript] [script source]     - Domain d1mzhb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mzh_A] [1mzh_B] [1mzh] SWISS-PROT database: [O66540] Domain organization of [DEOC_AQUAE] by SWISSPFAM Domain found in 1MZH: [DeoC ] by SMART

Other resources with information on 1MZH

Community annotation for 1MZH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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