1S0W Hydrolase date Jan 05, 2004
title 1b Lactamse B Lactamase Inhibitor
authors G.Schreiber, D.Reichman, Israel Structural Proteomics Center (
compound source
Molecule: Beta-Lactamase Tem
Chain: A, B
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Beta-Lactamase Inhibitory Protein
Chain: C, D
Synonym: Blip
Engineered: Yes
Mutation: Yes

Organism_scientific: Streptomyces Clavuligerus
Organism_taxid: 1901
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.785 125.507 158.763 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CA enzyme
related structures by homologous chain: 1HTZ, 1JTD, 1XXM
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Primary referenceThe modular architecture of protein-protein binding interfaces., Reichmann D, Rahat O, Albeck S, Meged R, Dym O, Schreiber G, Proc Natl Acad Sci U S A 2005 Jan 4;102(1):57-62. Epub 2004 Dec 23. PMID:15618400
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (1s0w.pdb1.gz) 69 Kb
  • Biological Unit Coordinates (1s0w.pdb2.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 1S0W
  • CSU: Contacts of Structural Units for 1S0W
  • Likely Quarternary Molecular Structure file(s) for 1S0W
  • Structure Factors (344 Kb)
  • Retrieve 1S0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1S0W from S2C, [Save to disk]
  • Re-refined 1s0w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1S0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1S0W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1S0W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1s0wa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1s0wb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1s0wc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1s0wd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1s0w_C] [1s0w_B] [1s0w] [1s0w_D] [1s0w_A]
  • SWISS-PROT database: [P62593] [P35804]
  • Domain organization of [BLAT_ECOLX] [BLIP_STRCL] by SWISSPFAM
  • Other resources with information on 1S0W
  • Community annotation for 1S0W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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