1Y64	Structural Protein	date	Dec 03, 2004
title	Bni1p Formin Homology 2 Domain Complexed With Atp-Actin
authors	T.Otomo, D.R.Tomchick, C.Otomo, S.C.Panchal, M.Machius, M.K.Rosen
compound		source
Molecule: Actin, Alpha Skeletal Muscle Chain: A Synonym: Alpha-Actin 1		Organism_scientific: Oryctolagus Cuniculus Organism_common: Rabbit Organism_taxid: 9986 Tissue: Muscle
Molecule: Bni1 Protein Chain: B Fragment: Fh2 Domain, Residues 1327-1769 Synonym: Synthetic Lethal 39 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Gene: Bni1, Ppf3, She5 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.289 R_Free 0.313
crystal cell	length a length b length c angle alpha angle beta angle gamma 231.997 56.229 100.945 90.00 107.70 90.00
method	X-Ray Diffraction	resolution	3.05 Å
ligand	ATP, CA, HIC	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis of actin filament nucleation and processive capping by a formin homology 2 domain., Otomo T, Tomchick DR, Otomo C, Panchal SC, Machius M, Rosen MK, Nature 2005 Jan 5;. PMID:15635372

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (1y64.pdb1.gz) 117 Kb LPC: Ligand-Protein Contacts for 1Y64 CSU: Contacts of Structural Units for 1Y64 Likely Quarternary Molecular Structure file(s) for 1Y64 Structure Factors (191 Kb) Retrieve 1Y64 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y64 from S2C, [Save to disk] Re-refined 1y64 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y64 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Y64

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Y64, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y64] [1y64_B] [1y64_A] SWISS-PROT database: [P68135] [P41832] Domain organization of [ACTS_RABIT] [BNI1_YEAST] by SWISSPFAM Domains found in 1Y64: [ACTIN] [FH2 ] by SMART

Other resources with information on 1Y64

Community annotation for 1Y64 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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