1ZNP Structural Genomics, Unknown Function date May 11, 2005
title X-Ray Crystal Structure Of Protein Q8u9w0 From Agrobacterium Tumefaciens. Northeast Structural Genomics Consortium Targe
authors A.P.Kuzin, Y.Chen, F.Forouhar, S.M.Vorobiev, R.Xiao, L.C.Ma, T.Ac G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomic Consortium (Nesg)
compound source
Molecule: Hypothetical Protein Atu3615
Chain: A, B, C, D, E, F, G
Engineered: Yes
 Organism_scientific: Agrobacterium Tumefaciens Str. C58
Organism_taxid: 176299
Strain: C58 Atcc 33970
Gene: Agr L 2421
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) + Magic
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet21
symmetry Space Group: C 2 2 21
R_factor 0.209 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.967 91.323 291.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk]
  • Biological Unit Coordinates (1znp.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (1znp.pdb2.gz) 47 Kb
  • Biological Unit Coordinates (1znp.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (1znp.pdb4.gz) 47 Kb
  • Biological Unit Coordinates (1znp.pdb5.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1ZNP
  • CSU: Contacts of Structural Units for 1ZNP
  • Likely Quarternary Molecular Structure file(s) for 1ZNP
  • Structure Factors (893 Kb)
  • Retrieve 1ZNP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZNP from S2C, [Save to disk]
  • Re-refined 1znp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZNP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZNP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZNP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1znp_A] [1znp] [1znp_F] [1znp_C] [1znp_B] [1znp_G] [1znp_D] [1znp_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1ZNP
  • Community annotation for 1ZNP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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