2FFM Structural Genomics, Unknown Function date Dec 19, 2005
title X-Ray Crystal Structure Of Protein Sav1430 From Staphylococc Northeast Structural Genomics Consortium Target Zr18.
authors F.Forouhar, Y.Chen, S.Jayaraman, H.Janjua, R.Xiao, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomic Consortium (Nesg)
compound source
Molecule: Sav1430
Chain: A
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus Subsp. Aureus Mu
Organism_taxid: 158878
Strain: Subsp. Aureus Mu50
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 41 21 2
R_factor 0.248 R_Free 0.293
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.235 40.235 122.947 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
ligand MSE enzyme
note 2FFM is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (2ffm.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 2FFM
  • CSU: Contacts of Structural Units for 2FFM
  • Likely Quarternary Molecular Structure file(s) for 2FFM
  • Structure Factors (92 Kb)
  • Retrieve 2FFM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FFM from S2C, [Save to disk]
  • Re-refined 2ffm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FFM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FFM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FFM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ffm_A] [2ffm]
  • SWISS-PROT database: [Q99U58]
  • Domain organization of [Q99U58_STAAM] by SWISSPFAM
  • Domain found in 2FFM: [Nfu_N ] by SMART
    • Other resources with information on 2FFM
  • Community annotation for 2FFM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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